CDS

Accession Number TCMCG007C47592
gbkey CDS
Protein Id XP_009108012.1
Location join(8089412..8089498,8089584..8089757,8089841..8090082,8090167..8090338,8090411..8090449,8090532..8090600,8090667..8090783,8090894..8091105,8091276..8091434,8091500..8091699,8091799..8091956,8092043..8092139,8092234..8092325,8092405..8092677)
Gene LOC103833692
GeneID 103833692
Organism Brassica rapa

Protein

Length 696aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009109764.3
Definition fimbrin-5 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category Z
Description Calponin homology domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K17275        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003779        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005884        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007015        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009846        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009860        [VIEW IN EMBL-EBI]
GO:0009932        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0032432        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048868        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0051015        [VIEW IN EMBL-EBI]
GO:0051017        [VIEW IN EMBL-EBI]
GO:0051639        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051764        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0061572        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCAAGTTACGTAGGTGTTGTGGTCTCTGATCCATGGTTACACAGCCAATTCACACAAGTCGAGTTACGTACCCTTAAATCCAAGTTTAACTCAAATAAAACGCTCTTGGATCGTTTCACCGTTGGAGACTTACCTCCTGTCTTGGCAAAGTTGAACGCATTTAGTGGCACCTTTGATGAGGATGAGATCAAATCTGTATTGGACAAGTCTTATTCCAATACTTCTGATCAAGAAGTCGATTTCGAGACTTTCCTCCGGGCGTATTTAAGTGTGCAAGCACGAGGAGTGGAAAAGTCAGGAGGATCAAAGGCTTCTTCTTCTTCATTCCTCAAAACTAGCACCACCACTGTTCACCATGCCATTAACGAATCCGAGAAGGCTTCCTACGTTTCCCATGTCAACAGTTACTTGAGGGATGATCCTTTCTTGAAGTCTTACCTTCCTATCGATCCTGCTACCAATGCTTTCTTTGATCTTGTTAAAGATGGTGTTCTTTTGTGTAAGCTTATAAATCTTGCTGTTCCTGGGACCATCGACGAAAGAGCTATCAACACCAAGAAAATACTCAACCCATGGGAGAGGAATGAGAATCTTACTCTAGGTCTCAATTCTGCCAAAGCTATTGGCTGCACTGTCGTCAACATTGGAACTCAGGACATTGCTGAAGGAAGACCATATCTCGTACTTGGGTTGATATCGCAGATTATTAAGATTCAAATGCTGGCTGATCTCAATTTTAAGAAAACTCCTTCACTTTTCCAATTGGTGGACGACACTCAGGATGCGGAGGAGCTCATGGGACTGGCTCCTGAAAAAGTATTGCTCAAATGGATGAATTTTCATCTCAAGAAAGCTGGTTATGAAAAGCAAGTTACCAATTTTTCTTCTGATGTTAAGGACGGTGAGGCATATGCGTATCTGCTTAATGCTCTTGCTCCAGAACACAGTTCACATGTGGCATTAGAGACCAAAGACCCCACAGAAAGAGCCAAAAAGGTTCTTGAACAGGCTGAGAAGATGGATTGTAAAAGATACCTTTCTCCAAAGGATATTGTCGACGGCTCTGCAAATCTTAACCTTGCCTTTGTGGCCCAAATATTTCAACACAGGAATGGATTGACTGATGACAGTTCAAAGTCGACGTCATTTGCTGAGATGGTGAAAGATGATGTGGAATCTTCACGAGAAGAAAGATGTTTCCGCCTCTGGATTAACAGTCTTGGAACTGCTACTTATGTCAACAATGTTTTTGAGGATCTTAGGAATGGATGGGTTCTTCTTGAAGTTCTTGATAAAGTGTCACCTGGCTCGGTCAACTGGAAACACGCAAATAAACCTCCCATAAAAATGCCATTCAAAAAGGTTGAGAACTGCAATGAAGTTATTAAGATTGGGAAAGAGCTGCGCTTCTCCCTTGTAAATGTAGCTGGTAACGACATTGTCCAAGGAAACAAGAAACTCCTTCTCGCTTTCCTGTGGCAACTAATGAGATATACAATGCTCCAACTTCTGAAGAACTTGAGATCTCACTCGCAAGGTAAAGAAATTACAGATGCCGATATTCTATACTGGGCGAATAGGAAAGTGAAACGAGTAGGACGAACTTCTCAGGCTGAGAGCTTCAGGGACAAGAATCTGTCAAGTGGAATCTTCTTTCTGGAGCTTCTTACTGCGGTAGAGCCAAGAGTTGTCAACTGGAGCCTCGTTACCAGTGGAGAAACAGAGGAGGACAAGAAGTTGAACGCTACATACATAATCAGTGTTGCAAGGAAGCTCGGATGCTCCATATTCTTGTTGCCTGAGGATATCATAGAGGTGAACCAGAAGATGATGCTTATTCTGGCTGCTAGTATCATGTACTGGAGCCTTCAGCAACAATCAGACACAGAGTCGAATGTCTCAGAAGATGCTACTGACGAAGGCGATGCAAATTCTGTTACTGGTGAAATCTCCAACTTGTCCCTTGATGAGGCTTCTGAGTCTTCTCCAATTGTCCAAGATCAAGAATTATTGACAAAGGCAGACGAGGATACGGATAAGGATGAGGTTGATGGTGATGGTGATGGTGAGAATAATAATGATGCTTAA
Protein:  
MSSYVGVVVSDPWLHSQFTQVELRTLKSKFNSNKTLLDRFTVGDLPPVLAKLNAFSGTFDEDEIKSVLDKSYSNTSDQEVDFETFLRAYLSVQARGVEKSGGSKASSSSFLKTSTTTVHHAINESEKASYVSHVNSYLRDDPFLKSYLPIDPATNAFFDLVKDGVLLCKLINLAVPGTIDERAINTKKILNPWERNENLTLGLNSAKAIGCTVVNIGTQDIAEGRPYLVLGLISQIIKIQMLADLNFKKTPSLFQLVDDTQDAEELMGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSDVKDGEAYAYLLNALAPEHSSHVALETKDPTERAKKVLEQAEKMDCKRYLSPKDIVDGSANLNLAFVAQIFQHRNGLTDDSSKSTSFAEMVKDDVESSREERCFRLWINSLGTATYVNNVFEDLRNGWVLLEVLDKVSPGSVNWKHANKPPIKMPFKKVENCNEVIKIGKELRFSLVNVAGNDIVQGNKKLLLAFLWQLMRYTMLQLLKNLRSHSQGKEITDADILYWANRKVKRVGRTSQAESFRDKNLSSGIFFLELLTAVEPRVVNWSLVTSGETEEDKKLNATYIISVARKLGCSIFLLPEDIIEVNQKMMLILAASIMYWSLQQQSDTESNVSEDATDEGDANSVTGEISNLSLDEASESSPIVQDQELLTKADEDTDKDEVDGDGDGENNNDA